Package: AlleloBin 1.0.0

AlleloBin: A Shiny Application for Allele Binning in Microsatellite Markers

Provides allele binning functionality for SSR/microsatellite markers using least-squares minimization (Idury & Cardon (1997) <doi:10.1101/gr.7.11.1104>). Includes a 'Shiny' application for interactive use, summary statistics, and visualization.

Authors:VP Prasanth [aut, cre], Subhash Chandra [aut], DA Hoisington [aut], B Jayashree [aut]

AlleloBin_1.0.0.tar.gz
AlleloBin_1.0.0.zip(r-4.7-any)AlleloBin_1.0.0.zip(r-4.6-any)AlleloBin_1.0.0.zip(r-4.5-any)
AlleloBin_1.0.0.tgz(r-4.6-any)AlleloBin_1.0.0.tgz(r-4.5-any)
AlleloBin_1.0.0.tar.gz(r-4.7-any)AlleloBin_1.0.0.tar.gz(r-4.6-any)
AlleloBin_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
AlleloBin/json (API)

# Install 'AlleloBin' in R:
install.packages('AlleloBin', repos = c('https://vpprasanth.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/vpprasanth/allelobin/issues

On CRAN:

Conda:

3.18 score 477 downloads 3 exports 46 dependencies

Last updated from:7a6f4ae713. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK143
source / vignettesOK231
linux-releaseOK165
macos-releaseOK95
macos-oldrelOK97
windows-develOK67
windows-releaseOK74
windows-oldrelOK88
wasm-releaseOK96

Exports:allele_binningAlleloBinsave_results

Dependencies:base64encbslibcachemcellrangerclicommonmarkcpp11crayondigestfastmapfontawesomefsgluehmshtmltoolshttpuvjquerylibjsonlitelaterlifecyclemagrittrmemoisemimeopenxlsxotelpillarpkgconfigprettyunitsprogresspromisesR6rappdirsRcppreadxlrematchrlangsassshinysourcetoolsstringitibbleutf8vctrswithrxtablezip